In draft guidelines on GAAR, on which stakeholders' comments were invited, the ministry rejected suggestions to prescribe a flat tax on all foreign institutional investor transactions but tried to soften the blow by clarifying non-resident investors among FIIs would not be taxed.
This means the government would tax the net capital gains of only FIIs registered in India and not seek the identity of sub-account holders.
"In other words, the custodians will now have to cut the tax deducted at source mandatorily.
"Earlier, they did not cut TDS on transactions by FIIs from tax havens," said an investment banker.
The Central Board of Direct Taxes said exempting capital market transactions and having a flat tax on FII gains without distinction between various transactions were not viable options, as they were not permitted under the provisions of the Income Tax Act.
After stakeholders' comments, the board would come out with the final guidelines.
It, however, said a safe harbour could be provided to FIIs subject to the payment of taxes in keeping with domestic law.
Safe harbour rules exempt taxpayers from detailed scrutiny and allow tax authorities to accept the transfer price declared by the assessee.
GAAR provisions would apply to income arising or accruing after April 1, 2013.
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